Running PSORTb v3.0 on Dsui_2086 (696 amino acids)
SeqID: Dsui_2086 Analysis Report: CMSVM- Unknown [No details] CytoSVM- Unknown [No details] ECSVM- Extracellular [No details] ModHMM- Unknown [1 internal helix found] Motif- Unknown [No motifs found] OMPMotif- Unknown [No motifs found] OMSVM- Unknown [No details] PPSVM- Unknown [No details] Profile- Unknown [No matches to profiles found] SCL-BLAST- Periplasmic [matched 15597677: hypothetical protein[Pseudomonas aeruginosa PAO1]] SCL-BLASTe- Unknown [No matches against database] Signal- Non-Cytoplasmic [Signal peptide detected] Localization Scores: Extracellular 5.02 Periplasmic 4.91 OuterMembrane 0.07 CytoplasmicMembrane 0.00 Cytoplasmic 0.00 Final Prediction: Unknown (This protein may have multiple localization sites.) -------------------------------------------------------------------------------
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>Dsui_2086 MTHVPSVPAGAPAGALTRLWRSAAATFLLSALAAAGLGRAEAADAGQIARGEYLARLGDC VACHTAEGGKSMAGGRELATPFGVLFSTNITPDKETGIGNYTFAQFDRAMRKGVAADGHN LYPAMPYPSYAKMTGEDMQALYAYLMQGLAPVKQANKPTAMRWPFNQRWGLSLWNWAFLD ATPFQPDAGKDATWNRGAYLVQGLGHCGACHTPRGIAFQEKAMSDAGSKGKHFLAGETVE SWRALSLRGLWTVEDTALFLKTGQNRFATASGNMAEVIHHSTQHVKDEDLVAIATYLKSL PPGEHELPAPSVPRSEVAGKVPGNLFSSRGGLAYVQFCGDCHRQDGNGVSKIFPPLAGNP AVTAKDPATLLHITLTGWKTASTAAHPRVFTMPGFARLNDQELAELITFVRSSWGNGGEA VTASQVKKMRAEVVKQDPKAIDNSKFETPRLADMLAKPNAEQLVRGMRLHLETKDLLPNH VGDQLNCTSCHLNAGTVADGSPFVGVSAFFPSYAPRAGRIITLEDRINGCFKRSMNGKPL PVESADMKAMVAYFDWMKGATKPEDKVPGRGIGKIDRSLKPDSDNGKKIYAEQCAVCHGE NGEGLKSADGKMVYPPLWGDESFNIGAGMARTYTAAAFVKRNMPIGFHGKFPLGQGGLSD QEALDVAEYFSHQPRPDFPEKVKDWPNGKKPEDARY
Lawrence Berkeley National Laboratory