PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on Ga0059261_1343 (464 amino acids)

SeqID: Ga0059261_1343 
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 399391: Dihydrolipoyl dehydrogenase 3]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>Ga0059261_1343
MAEYDFDVLVIGSGPGGYVAAIRAAQLGLKTACAEGRETLGGTCLNVGCIPSKALLHASE
LYEEAASGALAKLGVKLGKVELDLDAMHAQRLDAVKGLTGGIEFLFKKNKVEWLKGYATF
TGKDSVKVGDREVRAKNIVIATGSSVTPLPGVEIDQKIVVDSTGALELAKVPEHLVVIGG
GVIGLELGSVWRRVGAKVTVVEYLDQILPGFDADVRKEAARLFKKQGIEFKTGTKVTGVA
VKGGKATITVEPAAGGAAETIEADNVLVAIGRKPNTDGLGLDAAGLTVNQRGQIETDHSF
KTSVPGIWAIGDVIPGPMLAHKAEDEGIAVAENIAGLTGIVNHDVIPSVVYTMPEIAGVG
LTEEAAKAKGEVKVGKFPMAGNSRAKTNHEPDGFVKVIADAKTDRVLGVWIITSVAGTMI
AQAAQAMEFGATSEDIAYTCHAHPTHSEAIKEAAMAVTGKPIHI