PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on Ga0059261_2299 (376 amino acids)

SeqID: Ga0059261_2299 
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Unknown                       [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 15598361: histidinol-phosphate aminotransferase[Pseudomonas aeruginosa PAO1]]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.26
    Periplasmic            0.48
    CytoplasmicMembrane    0.24
    OuterMembrane          0.01
    Extracellular          0.01
  Final Prediction:
    Cytoplasmic            9.26

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>Ga0059261_2299
MTATNSKPQPKPWIMDIAPYVPGKSKTDDGRKAIKLSSNENPLGTSDKARAAFATAANSL
ERYPDASAVELREALAELHGLDAARIIYGNGSDEVLHLAAGAFAGPGDEIIYVNYGFTVY
PIATKRVGATPVVAADADYATDVDAILASVTDRTRIVFVANPNNPTGTYASREEIARLHA
GLRPDILLVLDHAYAEYIEGEIDDGGMELAKTQPNVLVTRTFSKLYGLAAERIGWGYGSA
EVIEAMHRIRLPFSITIAGTAAAIAALHDSAFVEHTRSHNAQWRRWFADEIAKLGNAGLR
AVPSQANFVLVLFEGALTAEAAYKGLMDEGYIVRWLPGQGLPHGLRITIGTEEETRAVAA
ILNKLVAETQQPATAG