PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on Ga0059261_2979 (700 amino acids)

SeqID: Ga0059261_2979 
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 585455: Malate synthase G]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

-------------------------------------------------------------------------------

Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>Ga0059261_2979
MTAYVTRAGLSVAEPLARFVEERVLPGPGIDADVFWSGAAAIFARFAPRNRALLDTRDSL
QAQIDAWCAEDPARAADPAAQEAFLRGIGYLVDQPGAFTVTTADVDAEIATMAGPQLVVP
ALNARFVLNAANARWGSLYDAFYGTDALPGAARAGGYDAERGAQVIAAAKAFLDEAVPLA
GMKWVDFAGGDLPLADPGQLVGTRGDSLLFRHNGLHIEVVIDRDSTIGRTDPAGIADVLL
EAALTTIVDLEDSIAAVDADDKVAAYSNWLGLMRGDLVETFDKGGKTLTRRLAEDRVYQR
PFASDLVLPGRSLLFVRNVGHLMTNPAVLIDGDEAPEGILDAIVTSTIALHDLKGLGTHR
NSRTGSVYIVKPKMHGPDEAAFTNDLFDAVEDLLGLDRHTIKVGVMDEERRTSANLAACI
HAVKGRIAFINTGFLDRTGDEIHSSMRAGPMIPKAEMKASSWIKAYEDRNVRIGLAHGLS
GRAQIGKGMWAAPDRMAEMLEVKVGHPQSGANTAWVPSPTAATLHAMHYHTVDVFARQRE
IAGETVPGLAPLLTIPVAAPGRNWTPEDVARELDNNAQGILGYVVRWIDQGVGCSKVPDI
NDIGLMEDRATLRISSQHMANWLLHGVATAADVDAALVRMAAKVDAQNAGDPLYRPMAGN
EAASLAFQAARALVFDGVAQPNGYTEPLLHRFRAEAKARG