PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on H281DRAFT_01519 (498 amino acids)

SeqID: H281DRAFT_01519 
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 61252084: Polyol:NADP oxidoreductase]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>H281DRAFT_01519
MSTPASLPRLTRHALSALSQHVLSSEHAAWREPSIGIVHLGIGNFHRAHQALYTEEAMLA
EGGDWGICGVTLQGDVAKRNALMEQEGVYSVVERGPEGAKVTVVRALREVLAMPHDHDAL
FARLADPSVRIVSLTVTEKGYCRNAKTGDVALDNPAVVHDLSHPHAPRSVPGILVAALRQ
RRDAAREPFTVLSCDNLAHNGAALRQVVCSFAREFDPALADWIAVEVAFPSTMVDRIAPA
TTDFEHATVAAALGYRDAAPVPCEPFRQWVIEDRFPAGRPAWHAVGAQLVDDVTPFELAK
LRMLNGTHSTLAYLSMLGGFTTIDEAIADPAMRNLIHAMMTEEIAPTLNMPASFDVANYR
DALLARYANPALKHRCAQIAMDGSQKIPPRLLGTIAARIDAGQPFTRLALAVAGWMTFLR
GYADDGSRYDISDPLAENLKALAASANGDPRALMDTLLGVREIFTAELAAQPAFRAALLH
ALQLLQDNGARAAVAALQ