PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on H281DRAFT_02329 (577 amino acids)

SeqID: H281DRAFT_02329 
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 15595550: dihydroxy-acid dehydratase[Pseudomonas aeruginosa PAO1]]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>H281DRAFT_02329
MADSNQTKKPLRSQAWFGLKDRDGFLHRSWMKNQGIPHDEFDGRPVIGICNTWSELTPCN
AHFRELAEYVKKGVHEAGGLPLEFPVMSLGETNLRPTAMLFRNLASMDVEESIRGNPMDG
VILLVGCDKTTPALLMGAASCNLPALAVSGGPMLNGRFRGKHIGSGTGVWQMSEEVRAGS
MTQEEFTEAESCMNRSRGHCMTMGTASTMASMVESLGMGLPHNAAIPAVDARRQVLAHLA
GRRIVDMVREDLTMDKILTRQAFENAIRTNAAIGGSTNAVVHLIALAKRIGVELSLEDWE
LGSNVPCLVNLQPSGEYLMEDFYYAGGLPAVLKQLGEQGLLHREALTVNGKTIWDNVRNA
PNHDEKVITTFAEPFKPKAGIAVLKGNLAPNGAVIKPSAATAELLKHRGRAVVFENIEEL
HAKIDDESLDIDENCIMVLKGAGPKGYPGFAEVGNMPLPKKVLQKGITDMVRISDGRMSG
TAYGAVVLHVSPEAAAGGPLAFVQTGDMIELDVEARRLHLDVSDDELARRRAAWQAPESP
KRGYYKLYVEHVLQADQGADLDFLVGSSGAPVPRDSH