PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on H281DRAFT_04486 (465 amino acids)

SeqID: H281DRAFT_04486 
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 2500947: Cystathionine gamma-synthase]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>H281DRAFT_04486
VASPTSMSANRFDTLALHAGAAPDPATGARATPIYQTTSFSFRDSDHAAALFNMERAGHV
YSRISNPTVAVFEERVAALENGAGAIGTASGQAALHLAIVTLMGRGSHIVASSALYGGSH
NLLHYTLRRFGIETTFVKPGDIDAWRAALRPNTRLLFGETLGNPGLDVLDVATVAQIAHE
HRVPLLVDSTFTTPYLLKPFEHGADFVYHSATKFLGGHGTTIGGVLVDGGTFDFDASGRF
PEFTEPYEGFHGIIFSEESTAAPFLLRARREGLRDFGACLHPQAAWQLLQGIETLPLRME
RHVANTRRVVEFLAGHAAVEAVAYPELPTHPDHALAKRLLPRGAGAVFSFNLRGDRAAGR
SFIEALSLFSHLANVGDARSLVIHPASTTHFRMDAAALAAAGIAEGTIRLSIGLEDPDDL
IDDLKRGLKAAQKASGSTAPRSGQSGSTEPGGSGSAATRPGKESA