PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on HSERO_RS07665 (615 amino acids)

SeqID: HSERO_RS07665 
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 16129225: component I of anthranilate synthase [Escherichia coli K12]]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>HSERO_RS07665
MNDCFALLDDHQASPADPRSRLYTRHVRTLCCTDAAGFAGLLEEMQTALRAGLHAVALWS
YELGAALQGLPHHRLQGPLARVLLFAHCERLAATEVDTWLAASCQADGADMFTSGGIANL
RSSVDEAAFSAAIARIRDYIAAGDTYQVNYTYRLHGDVHGDAIGLYRRLRARQPVPYGAL
VRDELGGMVLSCSPELFVSHQQGVLKAKPMKGTARALPPEQEGAETVNAQRALALAADEK
NRAENLMIVDLLRNDLGRVAVPGSVQVPHLFDVRRYGQVLQMTSTIRARLREHATLADTI
NALYPCGSITGAPKRRTMEIIHELESEPRGLYTGAIGWFDAPRPGGPAIGDFCLSVPIRT
LELQAPHAGLRKAVMGVGAGIVHDSQAAAEFAECQLKSSFLTGLEKDFGLFETLHASQQA
CRHLDLHLQRLQGSAAALGFPYDEAAIRQHLAATCAGLPANTTHRLRLALDAQGRITIQH
APLTPLAGPVKIFLAETATDSHDLFLRHKSTRRARYDAAWKAAEQRGGFDMLFFNERDEL
TEGGRSNVFVRIAGRWCTPPLSSGVLPGVMRRVLLADPAWDAVEAVITRADLLAAQEIVV
CNALRGALPAVLVKP