PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on N515DRAFT_0489 (1644 amino acids)

SeqID: N515DRAFT_0489 
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 15598264: NAD-dependent glutamate dehydrogenase[Pseudomonas aeruginosa PAO1]]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

-------------------------------------------------------------------------------

Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>N515DRAFT_0489
MNAIRAASETSIQAEVLDELKKSGFPTQRLDEAQFFISAFFSRVAAGDLELHTASEWAGL
IAGLLDFVQQRQPGRAAVRVFNPQAGHAGRSVVQIATDDMPFLVDTVSMIVSTRLQIHAV
IHPVVKAVRDASGRLQRLGADDGAPESVMHFEIDRLADEAEMAQLKTQIESSLDDVRASV
NDWSRMRDQALAIAADLPNRQLPLNKDSMQEAVEFMRWLADDNFTFLGYREYEVTQADGD
EVLRSLEGSGLGILHKQERSMAPRSLRSMAASELPQSGSTDAIILTKTNARSHVHRQGHM
DYVGVLRFDAHGKPVAEQRFLGLFSSNAYMARPQDVPLVRQRVEAVMARSGLKRDSYSGK
SLRHILETLPRDELFQSNEDELYATAIGILELRQRARTRLFVRRDRYGRFFTCLVFVPRE
RFNTSVRERIENMLRDALHGEQIDSSVLMGEAALARLHIVVRPRIGDHVSYDAAALEQSV
AAIVRNWHDDLRDALVKLMGDHDGVVLANRYGKALPAGYVEDVLPAAAAEDVRQLALLRG
DDAVRMSFYHPEQRPEELRFKVYRSGADIALSEVLPQLENLGLRVLTEHVYDVKTGGTPL
FIQDFEVQPVGNLTFSVEQVGSLFEDAFEQIWRVNAENDGFNRLVLGAKLSWRQVAMLRG
YCKYLLQTGVAFSQNYMEDAFNRYPAIAGLLVELFLAKFDPRREELGAVELKNARAALAG
EMQALIPESVRQAHPALIDGLVAALEQPRAEQIKAIEEAIGVLLENVSSLDDDRILRSFV
ALIRGTLRTSFFQQWEGAYRGYISFKFDSHRVPDLPKPVPYREIFVSAPRVEGIHLRFGA
VARGGLRWSDRREDFRTEVLGLVKAQMVKNTVIVPVGSKGGFVVKRPPLGGDRDAQLAEG
IACYRMFINGLLDITDNLVEGKVVPPHDVVRHDADDPYLVVAADKGTATFSDIANAISLE
HGFWLGDAFASGGSNGYDHKGMGITAKGAWESVKRHFRALGRDSQTQDFTCVGIGDMSGD
VFGNGMLLSRHIRLLAAFDHRHIFLDPNPDAERSFVERERMFKLPRSSWDDYDKSLISAG
GGVYPRTLKAIPVSPEVRAALGIKGDATQMAPNELLNAILKAPVDLLWNGGIGTYVKAAS
ESHADAGDRANNALRANGAELRCKMVGEGGNLGFTQKGRIEAAQHGVLLNTDFIDNSAGV
DTSDHEVNIKILLDDAVQRGELDTDARNRQLAAMTDEVGQLVLWDNYRQNQAITLMERQS
VRRLGSMAHFIRILEGEGLLDRQVENLPSETELTERKTRGQGMTRPELSVLLSYDKIKLY
QQLLDSDVPEDPYLSKELVRYFPEPLHEKYAEHMQRHRLKREIIATAVTNSTINRMGATF
MMRMQEDTGHGPAAIAKAYTAAREILGARELWAEIEALDSKVAEETQLDAIMQIWSLLRH
LTRWLLSRPGGTLEIAANVDRYQAGVAALYEAVPDTLTPTGKADFSTSQEKWEGLGLPTE
LSVRMARIPELRAMLDMLEVAQQSGQPVDQVAGVFYELGEALDLEWLRSQIEALPVEGHW
HAQARGSLLDELNHQHRALALQVLALAGGSKGTSPVQAWLQRDDATLKYTRNMLAEILTQ
NADYPIASVAVRRLAQLAAVPVNA