PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on N515DRAFT_0927 (665 amino acids)

SeqID: N515DRAFT_0927 
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 15597208: methylcrotonyl-CoA carboxylase, alpha-subunit (biotin-containing)[Pseudomonas aeruginosa PAO1]]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

-------------------------------------------------------------------------------

Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>N515DRAFT_0927
MFERVLIANRGEIACRVIRTCRRLGIRTIAVYSEADADAQHVRLADEAWPIGGPRPADSY
LRGETILEVARRSGAQAIHPGYGFLSENTAFARACTEAGIAFIGPRPASIDAMGSKAAAK
ALMEKHAVPLVPGYHGDNQDADFLAGQARSTGFPLMIKAAAGGGGKGMRIVRAEREFADA
LASAQREAANAFGDTRVILERYVEHPRHIEFQVFGDTHGNVIHLNERECSAQRRYQKVLE
ETPSPFLTPARRAAMGAAAVAAARAVDYVGAGTVEFIVGQDGEFFFMEMNTRLQVEHPVT
EETLGLDLVEWQLRVAAGEALPLRQEDVHAQGHAIEVRLYAEDPEQNFLPGSGKLLRLRL
PETSRHVRLDGGVIEGDTVTIFYDPMIAKLIVHDRDRAQALQRLREALMACEIAGPKSNI
AFLERLVRHPVVVEGRIDTGYLDRHLDEFLAGDAAPAPQLLFAAAVAALLHDERTVVAQA
AHGVDPHSPWARADAWRIGHAGKRIVALSLREQRYEVEAHGHDGDYQLCHGDASCHVQGA
RHDGAALSARFDGQSLRLPLHADAQRVLLHDSDGRRHSFARAAAFAWEARQGAGGNQVLA
PMPGRIVLVKARPGDQVEEGQELLVMEAMKMELALKAPRAGTIDSIGATQGDFVEADAVL
VRFAT