PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on PfGW456L13_1139 (725 amino acids)

SeqID: PfGW456L13_1139 
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 1170877: Malate synthase G]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>PfGW456L13_1139
MTEHVQVGGLQVAKVLFDFVNNEAIPGTGLTADKFWAGADKVIHDLAPKNKALLAKRDDF
QARIDAWHQERAGQAHDAVAYKTFLQDIGYLLPEAADFQATTQNVDEEIARMAGPQLVVP
VMNARFALNASNARWGSLYDALYGTDAISEADGAEKGKGYNKIRGDKVIAFARAFLDEAA
PLAAGSHVDSTGYKIVDGKLVVALKGGSNTGLRNDAQLIGFQGDAAAPTAILLKNNGLHF
EIQVDASTPVGQTDAAGVKDILMEAALTTIMDCEDSVAAVDADDKVVIYRNWLGLMKGDL
SEEVAKGGQTFTRTMNADRTYTAIDGSELSLHGRSLLFVRNVGHLMTIDAILDKDGNEVP
EGILDGLVTCLASMHNLNGNTSRKNTRTGSIYIVKPKMHGPEEAAFTNELFGRIEDVLGL
PRNTLKVGIMDEERRTTINLKACIKAASERVVFINTGFLDRTGDEIHTSMEAGPMVRKAD
MKAEKWIGAYENSNVDIGLSTGLQGRAQIGKGMWAMPDLMAAMLEQKIAHPMAGANTAWV
PSPTAAALHALHYHKVDVFARQAELAKRAHASVDDILTIPLAVNPQWTAEQIKNELDNNS
QGILGYVVRWIDQGVGCSKVPDINDVGLMEDRATLRISSQHIANWLRHGIVTEEQVMESL
KRMAPVVDRQNAGDALYRPLAPNFDSNIAFQAAVELVVEGTKQPNGYTEPVLHRRRREFK
AANGL