PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on PfGW456L13_3754 (427 amino acids)

SeqID: PfGW456L13_3754 
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 15597708: anthranilate dioxygenase large subunit[Pseudomonas aeruginosa PAO1]]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>PfGW456L13_3754
MSTHEYQLIATSKSPEDLVQHDRVDVSLYNDPALFEAELDKIFYRTWVWVAHESEVRNSG
DFKTATIGRRPVIVVRDKKNNINVLENRCRHRGATVCEKHKGNATGFTCPYHSWSYGLDG
KLRALPYPDGYEGILEKSELPLTSLRVESYAGMVFASYNDEIEPLEDFLGGAKHWMDLFM
KQGAGYPIKTQGEHKFSFKGNWKIQLENTTDGYHFPIVHKSFMSSVDEETSEMLSFMTDE
QAVTHSLGNGHSVMVMVPEHVDLDHDDGTEQLQERFAHVTEELSKTLPADQVRRIVRSLH
GAGFNLNLFPNVAMSMSFFRVLRPVSVTETEIRHVALGMDGGPEIANRERMRIHEHFQGP
FGFGSPDDAEAWDRVQRGSYAGVDAPILVNRGLNREITAENGDKVSHATDEGGMRGAYDM
WKRMMSQ