PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on WP_011444472.1 NCBI__GCF_000013325.1:WP_011444472.1 (427 amino acids)

SeqID: WP_011444472.1 NCBI__GCF_000013325.1:WP_011444472.1
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 54041555: Cystathionine gamma-synthase]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

-------------------------------------------------------------------------------

Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>WP_011444472.1 NCBI__GCF_000013325.1:WP_011444472.1
MTQKLETLTVHAGCEPDPTTKARITPIYQTASYVFDSAEHAANLFALAEFGNIYSRIMNP
TNAALEAKIAALEGGVAALGVASGHAAQFIVFHTLMEPGCEIVAAKKLYGGTLNQFAHGF
AKFGWKAVFVDADDPAAVAAAITDKTRGVFIESLANPGGVVQDIAAIAEVAHAAGVPLIV
DNTMASPALCRPIEHGADIVVHSCTKFLNGHGNSIGGLIVDAGRFDWAASDKFPSLSQPN
PSYHGAVLTEALKPVGPIAFIIGCRVLGLRDLGPAMAPMNAFLTLTGMETLALRIERHCA
NALHLAQWLQNHPKVAWVSYAGLPEDPYHQLAKQYLGGKGGAVFTFGVKGGYEAGVKLVQ
SVKLFSHLANIGDTRSLIIHPASTTHSQLGEEELVAAGAGPDTVRVSVGIEHIDDIVADL
AQALELV