PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on WP_014146819.1 NCBI__GCF_000968535.2:WP_014146819.1 (899 amino acids)

SeqID: WP_014146819.1 NCBI__GCF_000968535.2:WP_014146819.1
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 2506131: Cytoplasmic protein]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

-------------------------------------------------------------------------------

Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>WP_014146819.1 NCBI__GCF_000968535.2:WP_014146819.1
MNSKDPFGARQLLNPDRASPLSYYRLACLESAGAADLARLPHTIKILLESLLRNCDGYSI
TEDHVLGLAAWQAQGSRREIPYKPARVILQDFTGVPALVDLAAMRDAMNELGGDPKKINP
FIPCDLVIDHSVQVDYFGKANALPMNEAVEFQRNQERYEFLKWGQSAFQNLRVVPPSTGI
VHQVNLEYLAQVVFHNKNSDLCYPDSCVGTDSHTPMVNGLGVLAWGVGGIEAEAVILDQP
IYMLEPDVVGIKLTGKLPPGVTATDLVLRITELCRQFGVVGQFVEFYGSGLSQLSIPDRA
TISNMAPEQGSTVSFFPVDKAALNYMRLTGRSPEQIELTERYAKLQGLFRTDDAPEPEFT
RTLEVDLGEIEPALAGPKRPQDRIPLSQVGPTYRQTLIAPVGIRGMGLAESDLDRCGVVS
NKGACETITHGAVVIAAITSCTNTSNPSVMLGAGLVAKKAVEKGLKVKNYVKTSLAPGSQ
VVTEYLKQSGLLPYLEALGFYLVGYGCTTCIGNSGPLDVAVEEAIVDNDLVVSAVLSGNR
NFEGRVHPLTKTNYLASPPLVVAYALAGSTVVDMTREAIGQGSDGDPVFLRDIWPTTEEI
DDVVQKFVTPEMFRERYADVFTGTQAWQAIAVAGSERYQWNEQSTYIRKPPFFEGLGGGP
ETIGRLADMRVLALFGDSVTTDHISPAGQIAPDSPAALYLLEKGVERKDWNSYGSRRGND
QVMCRGTFANVRIHNLLVPGAEGNVTIHHPSGERMTFFDAAMKYKESGMPLCILAGKEYG
SGSSRDWAAKGPFMQGVKAVIAESYERIHRSNLIGMGILPLQFMSGESAQSLGLKGDETV
TVDIADDTVPQQVVDVTASAPDGSVTAFKAVSRIDTPIEIQYYRDGGILRTVLKKLRAG