PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on WP_015797990.1 NCBI__GCF_000023265.1:WP_015797990.1 (588 amino acids)

SeqID: WP_015797990.1 NCBI__GCF_000023265.1:WP_015797990.1
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Cytoplasmic                   [matched PS50862: AA_TRNA_LIGASE_II Profile - Cytoplasmic ]
    SCL-BLAST-        Cytoplasmic                   [matched 24212404: Aspartyl-tRNA synthetase]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            10.00
    Periplasmic            0.00
    CytoplasmicMembrane    0.00
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            10.00

-------------------------------------------------------------------------------

Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>WP_015797990.1 NCBI__GCF_000023265.1:WP_015797990.1
MSERTLPPAAGLRTHYIGALDESLLDRDVSVCGWVARIREHGEHLVFVDVRDHTGTVQCV
MDGRGSLHTEAAVRIEGQVARRPEGTENTDLATGAIELRVQHAEVLGDADPLPLPLDEHA
EVEETTRLRWRYLDLRRARMQRNLRARAATNAAIRRAMEAQGFVEVETPLLWTPTPEGAR
EFLVPSRTQPGSVYSLPQSPQIAKQLLMIGGVDRYYQIARCLRDEDLRADRQFEFTQLDL
EASFVTQEDVRSFVSAAIREVIRSVRGVDDVPIGTITWHEAMTRWGSDKPDRRFGMELVD
VTEAVRDSGARALAADYVTALVVAEPLSRSRLDELTQRARSAGAKGLAWFRVESRTPLEI
ASPLAKAMTPAALEALVERTGAEVGDTILVVADRFEVACTALGTIRLALGRHLADPDALD
VFWVIDFPLFEGVDDEGHLVSAHHPFTMPHADDMDLLEREPLRVRSQSYDLVMNGWELGS
GSIRIHRPDLQAQIFGLLGLDEQAAADRFGFLLDAFRFGPPPHGGFAFGIDRLVALLLGE
ETIREVIAFPKTQSGQDPMTGAPKPVDDGVLAALGLEARRRELRSGTR