PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on WP_035239932.1 NCBI__GCF_000745975.1:WP_035239932.1 (758 amino acids)

SeqID: WP_035239932.1 NCBI__GCF_000745975.1:WP_035239932.1
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Unknown                       [No matches against database]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            8.96
    CytoplasmicMembrane    0.51
    Periplasmic            0.26
    Extracellular          0.26
    OuterMembrane          0.01
  Final Prediction:
    Cytoplasmic            8.96

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>WP_035239932.1 NCBI__GCF_000745975.1:WP_035239932.1
MKTHNLGFPRIGDNRELKHALESYWRGETSQNQLLETGARLRKNNWAGQKALDYVPVGDF
SFYDHVLDTSWMLGNIPARARETCGSPLDRYFRTARGQSAGDGEANQICAGEMTKWFDTN
YHYIVPEFDPSSGFCLDAQPLLDQIQEAQKSGVTPKPVILGPVTYLFLGKAENIDKKTLL
KKLLPEYARLLNLLADRDVEWVQMDEPLMVTDLDNDWKLLVEQAYQTLGNEAVKIMLATY
FGSLGDNLDLALSLPVQALHVDAVRGKDQVPDLVSRLPEHMALSLGVIDGRNIWKTDLNA
LLDQLAPIHDQLGDRLWLAPSCALLHVPVDLEKETGLDTELLSWMAFARQKLVELDLLAT
ALNQGRTLVAAALEENAKALENRKNSARIHNPEVQARLARVDDSWGQRNQPYPERAKIHK
ERLNLPLYPTTTIGSFPQTKEIRALRLKFKKGEISQDAYTAGIRDQIRTTIEFQEEIGLD
VLVHGEAERNDMVEYFGEQLDGFAFSRYGWVQSYGSRCVKPPILFGDVSRPRPMTVAWIG
YAQSLSEKPVKGMLTGPVTILNWSFVRDDQSRADTCRQIALAIRDEVLDLEKAGVSIIQL
DEAALREGLPLRKHQWKAYLNWAVGAFRIAANGVKDATQLHTHMCYSEFNDIIDAITRMD
ADVITIEASRSNMEILNAFDKTAYPNEIGPGVYDIHSPNVPSVEFIVANMQEAAKRIPKE
RLWINPDCGLKTRAWPETKASLKNLAAAAKELRAAATA