PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on WP_086509569.1 NCBI__GCF_002151265.1:WP_086509569.1 (496 amino acids)

SeqID: WP_086509569.1 NCBI__GCF_002151265.1:WP_086509569.1
  Analysis Report:
    CMSVM-            CytoplasmicMembrane           [No details]
    CytoSVM-          Unknown                       [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           CytoplasmicMembrane           [13 internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Unknown                       [No matches against database]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    CytoplasmicMembrane    10.00
    Periplasmic            0.00
    Extracellular          0.00
    OuterMembrane          0.00
    Cytoplasmic            0.00
  Final Prediction:
    CytoplasmicMembrane    10.00

-------------------------------------------------------------------------------

Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>WP_086509569.1 NCBI__GCF_002151265.1:WP_086509569.1
MEAFNNLMYGFSIALEPINILYVFAGVFAGTIIGMLPGLGPISALALMIPLTFGMEPSSG
LILMAGVYYGAIFGGSTSSILLNAPGVAGTVATSFDGYPMAKQGMAGKALAIAAYASFIG
GTVSIIFLMMVAPLLGRVAVSFGPAEYFSLMVLGLTAVVSLSDKSLVKGLIAAVVGVMIS
IMGIDLQTGTERFTFGTVHLLDGIEFLVVALGIFALAEVFYMLLKGGGGKEQPRNAIGSL
KLSKQEIKQIAPPIGRSSILGFFTGVLPGAGATIGSFLGYSMEKRLAKDGDTFGKGNIKG
VAAPESANNAACTGSFVPLLTLGVPGSGSTAVLLGALLVMGVSPGPAMLVDRPDVFWGVV
ASMYLGNIFLLVLNLPLIPLIAKILDLPRPLLLSLILIFCMIGVYGMSFSVFDLLLLLGF
GLLGLGMRLFGFPAAPLILALILGDIMEESMRRALQISGGDWSIFIDKPISMWLLIIAAL
SLTLPLIKRVMARRSV