PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on 200074 FitnessBrowser__MR1:200074 (568 amino acids)

SeqID: 200074 FitnessBrowser__MR1:200074
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 15599679: |Glu-tRNA(Gln) amidotransferase subunit A|5013974 - 5015428]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

-------------------------------------------------------------------------------

Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>200074 FitnessBrowser__MR1:200074
MFEVTEVSIAELRAALESGRTTVVELVKSYLARVAAYDGPATETKLNALVVHNPDALKEA
EASDARRARGETLSPLDGIPYTAKDSYLVKGLTAASGSPAFKDLVAQYDAFAVERLRAAG
AICLGKTNMPPMANGGMQRGHYGRAESPYNAEYLTAPFASGSSNGAGTGTAASYSAFGLA
EETWSSGRGPASNNGLCAYTPSRGVISVRGNWPLTPTMDVVVPYTRTMADMLEVLDVIVA
DDPITRGDLWRLQPWVQIPKASTVRPESYLALAASADTLKGKRFGVPRMYINKDELAGTS
ENPGIGGPTGQRIHTRQSVIDLWEAARKALEAAGAEVIEVDFPLVSNCEGDRPGAPTVFN
RGIVTPQFLHDELWELSGWAFDEFLRANNDPKLNKLEDVVGHLIFPHDLCTLPNREGDLA
AGMEEYVNMAKRGLKSFDQIDSIPDGLRGLEKTRKLDLEDWMDGLKLDAVLFPTVADVGP
ADAHVNPASADIAWSNGVWVANGNLAIRHLGVPTVTVPMGVMADIGMPVGLTFAGRAYDD
NNLLKFAGAFESTGNRRIIPPRTPKLGQ