PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on 206529 FitnessBrowser__DvH:206529 (460 amino acids)

SeqID: 206529 FitnessBrowser__DvH:206529
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 15600456: argininosuccinate lyase[Pseudomonas aeruginosa PAO1]]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

-------------------------------------------------------------------------------

Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>206529 FitnessBrowser__DvH:206529
MAEKKMWGGRFKQGTATLVEEYTESVSYDRALYAQDIAGSMAHARMLARQGVLTAEEAAI
IVDGLATVRSEIEAGSFVWRREFEDVHMNIENRLTELVGDVGKKLHTGRSRNDQVALDFR
LFVSDRVRVWRELGRDLVGVIVDQARQHTATLLPGCTHMQPAQPVSLAQHLLAYAWMLRR
DIDRLEDCDKRARVCPLGAAALAGTTYPLDPASVADELGMYGTFRNSMDAVSDRDFVLEA
LFDGSVIMAHLSRLCEEFILWANPAFGYIFLPDAYATGSSIMPQKKNPDVAELMRGKTGR
VYGALTTMLTTVKGLPMTYNRDLQEDKEPFIDADRTVSASLEIMAGMLREVRFNTARMRT
ALRSGFLNATELADYLVGKGIPFREAHHLTGAAVALAEEKGVTLEELPLEDYRGICDRID
EDVYPILEPEAAVSRRETPGGTGPRSVAAQIAELDSWLGR