PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on 207537 MicrobesOnline__882:207537 (373 amino acids)

SeqID: 207537 MicrobesOnline__882:207537
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 15599397: hypothetical protein[Pseudomonas aeruginosa PAO1]]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

-------------------------------------------------------------------------------

Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>207537 MicrobesOnline__882:207537
MPFPTLQIGDLVARVPIIQGGMGVGISLSRLASAVANEGGIGVIAGAMIGMKEPDVAKNP
IEANLRALRREIEKAHEATKGIVGVNIMVALTTFSEMVRTSIESRADIIFSGAGLPLDLP
RHLHDACEQKKEEFRTKLVPIVSSARAASVIAKKWLSRFDYLPDAFVVEGPKAGGHLGFK
PEEIDDPGHSLEHVVPEVIEAVKPFEDAKGRAVPVIAAGGVYSGDDIRRFIEMGAAGVQM
GTRFVATHECDADERFKQAYVAAREEDVTIIKSPVGMPGRAIGNGFIEAMREGAKKPFKC
VFKCISTCEQEQTPYCIAAALINAMKGNLEKGFAFSGSNVFRIDSILSVRDLIGSLQREF
EEAVARRMVLQGS