PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on 208065 DVU2568 peptidase, M20/M25/M40 family (412 amino acids)

SeqID: 208065 DVU2568 peptidase, M20/M25/M40 family
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Unknown                       [No matches against database]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            8.96
    CytoplasmicMembrane    0.51
    Periplasmic            0.26
    Extracellular          0.26
    OuterMembrane          0.01
  Final Prediction:
    Cytoplasmic            8.96

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>208065 DVU2568 peptidase, M20/M25/M40 family
MSGHTAHSGTRHPHTGATVQRLAAEVESHIIAHRRALHAIPETGFEERCTAAYVAETLSG
LGLPVRTGIATTGVTALLDTGLEGPVVMLRADMDALPVTEATGLPFASRHEGRMHACGHD
AHMAMLLGAAEMLSAIVREEPGRLRGKVLFLFQPAEEGPGGAAPMIAEGVLDEPKVDVCL
GAHVWPSLPVGTVGVKPGPLMAAMDRFELAVHGRGGHAATPHLCVDALETATQVVGALQR
VVSRMTDPLEPVILTIGELHAGTAYNVIPGEARMAGTVRTFSPDVRAAWEDRIRTVADGV
CAAMGATATLDFHYCHGPVINTPRVAEVVRRAVVEARGEQAVTTPTPTLGGEDFSCFLER
IPGCFFFVGCGGDVPIHNPRFDLDERCLALGAETFVRAALLFTEGGATGMTA