PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on 208656 DVU3137 oxidoreductase, short chain dehydrogenase/reductase family (258 amino acids)

SeqID: 208656 DVU3137 oxidoreductase, short chain dehydrogenase/reductase family
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 130017: Acetoacetyl-CoA reductase]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>208656 DVU3137 oxidoreductase, short chain dehydrogenase/reductase family
MFSGMQDRRVMVTGSAKGIGKGIAEAFASRGARVFLADLSAEHVEATGNAFRAKGYNVAW
GVADVKDKASVEQVASKAVEQLGGLDVLCANAGIFPAAPLETMTEEQWDTVLDVNLKGMF
LTVQACIPALKESTSGRIVVTSSITGPVTGYPGWCHYGASKAGQMGFIRTAAIELARYGI
TINAVQPGNIATEGLQEQGEAYMASMASSIPLRRLGLPADIAAAAVFLASPDAGYITGQG
IIVDGGQILPETLEALDA

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory