PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on 350263 BT0735 aspartate decarboxylase AsdA (NCBI ptt file) (557 amino acids)

SeqID: 350263 BT0735 aspartate decarboxylase AsdA (NCBI ptt file)
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Unknown                       [No matches against database]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            8.96
    CytoplasmicMembrane    0.51
    Periplasmic            0.26
    Extracellular          0.26
    OuterMembrane          0.01
  Final Prediction:
    Cytoplasmic            8.96

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>350263 BT0735 aspartate decarboxylase AsdA (NCBI ptt file)
MYRKSKLSIKTIRTIMEKKTTGTVITKNFAKKMETISPFELKNKLIEMADESIKKMAHTM
LNAGRGNPNWIATEPREAFFLLGKFGLCECRRVQSLEEGIAGIPQQEGIAARFEAFLKEN
EKEAGARLLKETYNYMLMEHAADPDRLVHEWAESVIGDQYPVPDRILHFTELIVQDYLAQ
EMCDRRPPKGTFDLFATEGGTAAMCYVFDSLQENFLLNQGDSIALMIPVFTPYIEIPELR
RYQFDVTEISADQMTPDGLHTWQYKDEDIDKLKNPQIKALFITNPSNPPSYALSPETAAR
IVNIVKNDNPNLMIITDDVYGTFIPHFRSLMAELPHNTLCVYSFSKYFGATGWRNAVIAL
HEDNIYDKMIARLSEEQTAILNKRYASLSLHPEKMKFIDRMVADSRQIALNHTAGLSLPQ
QMQMSLFAAFSLLDKEDRYKAKMQEIIHRRLHALWDSTGFTLIEDPLRAGYYSEIDMLVW
AKKFYGDEFADYLQKTYNPLDVVFRLANETSLVLLNGGGFAGPKWSVRVSLANLNEADYV
KIGQSIKRVLDEYAENR