PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on 352079 FitnessBrowser__Btheta:352079 (314 amino acids)

SeqID: 352079 FitnessBrowser__Btheta:352079
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 15596032: phosphate acetyltransferase[Pseudomonas aeruginosa PAO1]]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

-------------------------------------------------------------------------------

Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>352079 FitnessBrowser__Btheta:352079
MEPIQNFAQLTAHLKQQNRRKRIAVVCANDPNTEYAITRALEEGIAEFLMIGDSAILEKY
PALKQYPDYVKTIHIEDSDEAAREAVRIVREGGADILMKGIINTDNLLHAILDKEKGLLP
KGKILTHLAVMEIPTYHKLLFFSDAAVIPRPTLQQRIEMIWYAICTCRHFGIEQPRVALI
HCTEKVSAKFPHSLDYVNIVELAEAGEFGNVIIDGPLDVRTACEQASGDIKGIVSPINGQ
ADVLIFPNIESGNAFYKSVSLFANADMAGLLQGPICPVVLPSRSDSGLSKYYSIAMACLQ
VAGCECREKLNLNR