PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on 353244 FitnessBrowser__Btheta:353244 (417 amino acids)

SeqID: 353244 FitnessBrowser__Btheta:353244
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 2507237: Gamma-glutamyl phosphate reductase]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

-------------------------------------------------------------------------------

Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>353244 FitnessBrowser__Btheta:353244
MTTNLNGTFAAVQAASRELALLSDDTINQILNAVADATIAETSFILSENEKDLARMDKSN
PKYDRLKLTEERLKGIAADTRNVATLPSPLGRILKETSRPNGMKLTKVSVPFGVIGIIYE
ARPNVSFDVFSLCLKSGNACILKGGSDADDSNRAIISVIHKVLEKFHVNPHIVELLPADR
EATAALLNATGYVDLIIPRGSSNLINFVRENARIPVIETGAGICHTYFDEFGDTRKGADI
IHNAKTRRVSVCNALDCTIIHEKRLGDLPALCDQLKESKVTIYADTQAYQALEGYYPAEL
LQPATPESFGTEFLDYKMAVKTVKSFEDALGHIQENSSRHSECIVTENKERATLFTKIVD
AACVYTNVSTAFTDGAQFGLGAEIGISTQKLHARGPMGLEEITSYKWVIEGDGQTRW