PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on 3606773 Dshi_0204 acyl-CoA dehydrogenase domain protein (RefSeq) (564 amino acids)

SeqID: 3606773 Dshi_0204 acyl-CoA dehydrogenase domain protein (RefSeq)
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 45593149: Crotonobetainyl-CoA dehydrogenase (Crotonobetainyl-CoA reductase)]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>3606773 Dshi_0204 acyl-CoA dehydrogenase domain protein (RefSeq)
MPHDGQDLSLNDAQTVVLPDLLNLTAAAVPPVEAVLEKAVAILKTQLAVDGRISGALVEE
HQTASHGLAWLATYAQSLRQMQKWAETLQADGKFGEVEQLIHQIAFGEYLWQLYGGIPMS
QGEILRLQDIGLSQDDQRGLMTPEIQTLTRSGNTQAARTRLVELMQERAAEITVGATGLD
DELEMIREQFRRFSVDKVEPHAHEWHLKDELIPMEIIEELAEMGVFGLTIPEEYGGFGLS
KASMCVVSEELSRGYIGVGSLGTRSEIAAELIICGGTEEQKQKWLPRLASAETLPTAVFT
EPNTGSDLGALRTRAVQDENGDWKVTGNKTWITHAARTHVMTLLARTKPDTTDHRGLSMF
LAEKTPGTDEAPFPTEGMTGGEIEVLGYRGMKEYELAFDNFHVKGENLLGGEEGKGFKQL
METFESARIQTAARAIGVAQSALDVSMQYAIDRKQFGKSLINFPRVSGKLAMMAVEIMVA
RQLTYFSAFEKDEGRRCDVEAGMAKLLGARVAWAAADNGLQIHGGNGFALEYGISRILCD
ARILNIFEGAAEIQAQVIARRLLG