PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on 3607557 FitnessBrowser__Dino:3607557 (499 amino acids)

SeqID: 3607557 FitnessBrowser__Dino:3607557
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 61252084: Polyol:NADP oxidoreductase]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

-------------------------------------------------------------------------------

Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>3607557 FitnessBrowser__Dino:3607557
MDQLISLSNATLGQLAIERPRYDRSRLTPGIVHIGVGNFHRAHQAWYLHRLMQAGQALDW
AIIGAGVRPYDAAMRDKLLAQDCLTTLIELAPDNVSAEVVGSMIDYLPIVDGNGPLIAQM
ADPAIRIVAMTVTESGYYIDPVTKGFDASHPDLVHDAAQPDRPRTAFGAIVAALRARRAA
GHGPFTCLSCDNLQGNGDILRQTVVSLARLTDPALADWIDTHASFPNSMVDCIAPATGPK
ELALAAQFGIRDVAVVTHEAFRQWVIEDEFCAGRPNWDAVGATFSDDVHAYETMKIRILN
AGHQVLANAGENLGIETISGCMAHPGIAAFFGKVQREEIAPTVAPVPGKTPASYVNLIET
RFANPRIVDTTRRVAFDGSARHPGFVLPIVRDQLAAGRSVEGLALVEALWARMCAGVRED
GTEIAPNDPLWDRLAPVARAARTDPALWLGQTGLYGDLKQSEPFADAFCAWLVLIWDKGC
EAALRRYITGTERHTATAS