PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on 3607827 Dshi_1235 xylulokinase (RefSeq) (480 amino acids)

SeqID: 3607827 Dshi_1235 xylulokinase (RefSeq)
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Unknown                       [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 15598778: |glycerol kinase|4013685 - 4015202]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.26
    Periplasmic            0.48
    CytoplasmicMembrane    0.24
    OuterMembrane          0.01
    Extracellular          0.01
  Final Prediction:
    Cytoplasmic            9.26

-------------------------------------------------------------------------------

Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>3607827 Dshi_1235 xylulokinase (RefSeq)
MFLGLDIGTSAVKGLVWDGARVLGAASAPLKVQVPVPGASEQDPEAWWRGILAVCAELSA
QPGWAEVSAIGLSGQMHGAVCLGPDGAVLRPAILWNDNRAVREAAEMAALPGLAARVGVP
PMPGFPAPKLAWLARTEPELHAATTMVMQAKDWVGMRLHGRAVTEYSEAAGTLWLDQAAR
DWDREALAFSGLERAQMPALGAGTDLAGPLSAAAAAALGLKPGVPVIRGGGDAMVGAAGI
GVVAPGQAMISLGTSGQYLVASEAHRPNPAGLVHSFAHCVPGAYIQMAAMLNGAAPMAWL
AGVLGRSVPDLLAAAETADPAHVPLFLPYLTGERTPHGDPEARAGFEGLSHGSGPGEMMR
AVVDAIAYSFADAQAVLGEAGVRAASPLAIGGGARSDLVLQTLADVLEVPVQRPASADLG
PALGAAKLAAVGSGAMPAARLADPPEIGAVFHPRPSARHGARLARYRALYSELRGVCARP