PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on 5208024 Shew_0540 enoyl-CoA hydratase/isomerase (RefSeq) (245 amino acids)

SeqID: 5208024 Shew_0540 enoyl-CoA hydratase/isomerase (RefSeq)
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Unknown                       [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 15596826: probable enoyl-CoA hydratase/isomerase[Pseudomonas aeruginosa PAO1]]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.26
    Periplasmic            0.48
    CytoplasmicMembrane    0.24
    OuterMembrane          0.01
    Extracellular          0.01
  Final Prediction:
    Cytoplasmic            9.26

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>5208024 Shew_0540 enoyl-CoA hydratase/isomerase (RefSeq)
MSNIQFQDEQGVRIITINRPDKRNALNLEMYARLTEYLIQGESDNGINAFLLKGEGDCFT
SGNDVADFLKNSDLGQNHPTVRFLFTLLDLTKPLVAAVAGPAVGIGTTLLLHCDLVYADN
TAKFQLPFVNLALVPEAGASLLLPRLVGQTKASELLLLGEPFDAQSALSMGLINDLLPSD
ELMSHAMSQSIKLAKKPPQALRASRRLIRGDSELIREQMQKELEEFAVRLQSDEAKAQFN
AFLSR