PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on 642684316 IMG__ChlphaBS1_FD:642684316 (430 amino acids)

SeqID: 642684316 IMG__ChlphaBS1_FD:642684316
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 15599644: histidinol dehydrogenase[Pseudomonas aeruginosa PAO1]]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

-------------------------------------------------------------------------------

Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>642684316 IMG__ChlphaBS1_FD:642684316
MLRLFTYAGEKSLLQHHLSRSVTCEPEVRQVVQEVLSDIQERGDEALFGYTRKFQGFQPG
EITVSLEEIREAYELADSDFIGILEEAYRNVTEFHELETEKSFFYEKENRVILGQRVTPI
ERVMLYVPGGKAAYPSSLLMNVAPARVAGVPGIYLTTPCDAEGKVSRHILAAAHVAGVDT
IYKFGGAQAVGAFAFGTQSVPKVDKITGPGNKYVAQAKKEVFGHVSIDSVAGPSEVVVIA
DDTADPEFIVLDLFAQSEHDPDASSVLITHSAELASEVSRLADEMVTTMERSEIIQHALT
ANGAIVLTRDLQESCEVSDMIAPEHLELHVRDSWEILPDLKHAGAIFMGGYSCESVGDYF
AGPNHTLPTNGTARFFSPLSVRDFIKHTSIISYSKEQLALSGEKIARFADHEQLQAHAEA
VRARLRKLDR