PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on 6937208 FitnessBrowser__SB2B:6937208 (257 amino acids)

SeqID: 6937208 FitnessBrowser__SB2B:6937208
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Unknown                       [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 15595942: probable enoyl-CoA hydratase/isomerase[Pseudomonas aeruginosa PAO1]]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.26
    Periplasmic            0.48
    CytoplasmicMembrane    0.24
    OuterMembrane          0.01
    Extracellular          0.01
  Final Prediction:
    Cytoplasmic            9.26

-------------------------------------------------------------------------------

Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>6937208 FitnessBrowser__SB2B:6937208
MAFLIERIEGNTAILTISNPPANTWTRESLNELKEKVLELNDNNEIYALVLTGEGEKFFS
AGADLKLFADGDKGNAATMAKAFGEAFETLSAFRGVSIAAINGYAMGGGLEVALACDIRI
AEIQAVMALPEATVGLLPCAGGTQNLTALVGEGWAKRMILCGERIDATKALNLGLVEEVV
EKGESLSAAIALAAKVAKQSPSAVAVCKKLIQSGRNMPRTQALPLERELFVGLFDTEDQA
EGVNAFLEKRAAQWKNR