PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on 6937531 FitnessBrowser__SB2B:6937531 (471 amino acids)

SeqID: 6937531 FitnessBrowser__SB2B:6937531
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Unknown                       [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 16129225: component I of anthranilate synthase [Escherichia coli K12]]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.26
    Periplasmic            0.48
    CytoplasmicMembrane    0.24
    OuterMembrane          0.01
    Extracellular          0.01
  Final Prediction:
    Cytoplasmic            9.26

-------------------------------------------------------------------------------

Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>6937531 FitnessBrowser__SB2B:6937531
MFPPLPTRINHAQLAVKTLDWTASTSDIFTPLASQPWSMLLDSADAPHMDAHWDILVAAP
VATLKVYESHSELTYAGNTLRLDTSECPFSQLQSVQHALFSVQKNTSLPFAGGALGSFNY
DLGRRIERLPSTALDDINLPLACIGFYDWALMRSYQSDSWQLVHYLGDDALNETLAWLEQ
QRDFAQAGAESNTSFSLLTEFTPQITRDQYQQKFNQVQSYLASGDCYQINLTQRFSADYQ
GSEWQAYLKLRSANVAPFSAFVRLEEGAILSISPERFIKLDGRQVETKPIKGTLPRLPDP
DADKTNAILLKASPKDRAENLMIVDLLRNDIGRVASPGSVRVPKLFEVESFPAVHHLVST
VTAQLAENKDAFDLLRAAFPGGSITGAPKIRAMEIIEELEPSRRSIYCGSIGYISQHGNM
DTSITIRTLAAVDGKLYCWAGGGVVADSIADSEYQETFDKISRILPILEQE