PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on 7024094 FitnessBrowser__ANA3:7024094 (331 amino acids)

SeqID: 7024094 FitnessBrowser__ANA3:7024094
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Unknown                       [No matches against database]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            8.96
    CytoplasmicMembrane    0.51
    Periplasmic            0.26
    Extracellular          0.26
    OuterMembrane          0.01
  Final Prediction:
    Cytoplasmic            8.96

-------------------------------------------------------------------------------

Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>7024094 FitnessBrowser__ANA3:7024094
MFDNKTILITGGTGSFGQKYTKTILERYKPKRLIIFSRDELKQYEMQQVFNAPCMRYFIG
DVRDGDRLKQAFKDVDFVIHAAALKQVPAAEYNPMECIKTNIHGAENVIRAAISNNVVKV
IALSTDKAASPINLYGATKLASDKLFVAANNVVGDGKTRFAAVRYGNVVGSRGSVVPFFK
QLIANGATSLPITHPDMTRFWITLQEGVDFVLKNFSRMQGGEIFVPKIPSIRITDLAAAY
GPSLEQKIVGIRPGEKMHEVMCPGDDSHHTIEFDDHFVITPSIKFFGRETDFSTNSLGEK
GTLVAAGFEYNSGNNSHFLNVNEILDMDALA