PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on 7025858 FitnessBrowser__ANA3:7025858 (667 amino acids)

SeqID: 7025858 FitnessBrowser__ANA3:7025858
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 71159629: P-protein]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

-------------------------------------------------------------------------------

Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>7025858 FitnessBrowser__ANA3:7025858
MQKPQPLNQTREQITHLDNELLSLLAERRRLSLEVARSKEVDVRPIRDTQREKELLARLV
TAGREKGLDAHYVISLYQSIIEDSVLNQQAYLHGRANPETQKQQYCIAYLGARGSYSYLA
ASRYCQRRQVEMLDLGCQSFDEIVQAVESGHADYGFLPIENTSSGSINEVYDVLQHTSLS
IVGETTIEVSHCLLGKPGSKLSDIKTVYAHPQPISQCSRYLSQHKDLRLEYCSSSAEAME
KVNQSADNSAAAIGSTEGGALYQLESIESGLANQKINQSRFIVVARKAVAVPEQLPAKTT
LIMATGQKAGALVEALLVLKAHQLNMSKLESRPIPGTPWEEMFYLDIDANISSEAMQQGL
KQLERITRFIKVLGCYPCETVKPTQLSNSQLLIEPSTSKAQVISTVSLDPSPYRFSKAYK
AQASEIHCGPFTIGAGHIGAIAKITLSKSLLQLESSQAALSAFERRVKQLKEAGFQAVIL
DGCHSLVSAEAIIPKLRQTLHQYDLLCVIAIEQATDMPLATGHADMLFLTGKQMFNQALL
AQAGTLPIPLFLERNDMASYEEFMAATEAILSQGNQQLILCDSGIRTYNNANLPTLDLAS
LIQIKANSHLPIVINPCYAISEDTLPLQTQGIKQLKADGLVLNCSLEEDKAHDALALMAE
VVRELYR