PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on 7026324 FitnessBrowser__ANA3:7026324 (292 amino acids)

SeqID: 7026324 FitnessBrowser__ANA3:7026324
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Unknown                       [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 1730032: Cytoplasmic protein]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.26
    Periplasmic            0.48
    CytoplasmicMembrane    0.24
    OuterMembrane          0.01
    Extracellular          0.01
  Final Prediction:
    Cytoplasmic            9.26

-------------------------------------------------------------------------------

Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>7026324 FitnessBrowser__ANA3:7026324
MCAPLCCVQGMGKDCDWILKHRETSNMAVEHSSLKGKVGLITGSTSGIGLATAHVLAEQG
CHLILHGLMPEAEGRRLAAEFAEQYHIHTYFSNADLRDPESIHAFMDAGVKALGSIDILV
NNAGIQHTENVAHFPIDKWNDIIAINLSSAFHTIQQAVPAMAEKRWGRIINIASVHGLVA
SVNKAAYCAAKHGIVGLTKVVAIECAEQGITVNAICPGWVDTPLINKQIEAIASNKGLSY
DEAKYQLVTAKQPLPEMLDPRQIGEFVLFLCSSAARGITGASLAMDGAWTAQ