PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on 8499666 FitnessBrowser__Miya:8499666 (270 amino acids)

SeqID: 8499666 FitnessBrowser__Miya:8499666
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 2498497: 2-dehydro-3-deoxyphosphooctonate aldolase]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

-------------------------------------------------------------------------------

Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>8499666 FitnessBrowser__Miya:8499666
MTPDALYERLRARRFIFAGPCALESLELAMDTAHAVREAAEAAGLFAVFKSSWDKANRTS
LDGFRGPGLARGMEWLARIKQETGLPVVTDIHEPDQAKPVAEVADVLQIPAFLCRQTSLL
LAAAQTGRVVNVKKGQFVAPWDMAPALDKLRSTGNQRILLTERGASFGYNNLVVDFRSLP
IMQGYGVPVVFDATHSVQLPGGKGTSSGGDRRFVPMLSRAAVAAGVDGVFLETHPDPDHA
LCDGPNSWPLDRLAPLLRDFAALWSLPYAS