PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on 8501943 FitnessBrowser__Miya:8501943 (317 amino acids)

SeqID: 8501943 FitnessBrowser__Miya:8501943
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 2494014: Serine acetyltransferase, plasmid]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

-------------------------------------------------------------------------------

Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>8501943 FitnessBrowser__Miya:8501943
MKKLDDLDARSLQGMPELERIVDEMCAPESYEAVYHRSLHDAPMPSLEALAEMVSRLRAA
LLPGFFGAATVHMESMRYHLAANLDSIYRILSEQIRRGACFTCADFARECGSCELHSRDK
AIQFLQRLPEIRRMLASDVKAAYEGDPAAKSPGETVFCYPSIAAMINHRIAHELYRMEVP
LIPRIISEMAHSRTGIDIHPGARIDEEFFIDHGTGVVIGETCIIGRGCRIYQGVTLGALS
FPKDGDGVLIKGNPRHPILEDNVTVYAGATILGRVTIGAGSMIGGNVWVTHDVPPGSKIV
QQRSAKPKPDEELVGRK