PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on AMB_RS09175 FitnessBrowser__Magneto:AMB_RS09175 (506 amino acids)

SeqID: AMB_RS09175 FitnessBrowser__Magneto:AMB_RS09175
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 16129225: component I of anthranilate synthase [Escherichia coli K12]]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

-------------------------------------------------------------------------------

Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>AMB_RS09175 FitnessBrowser__Magneto:AMB_RS09175
MSHQPDFSAFAAAYDDGKPQVVWRVLVADLETPVSAFMKLAGGQPNAFLLESVEGGAVRG
RYSILGMRPDLLWKCVGNEAWINRNARSKTSEFLPCPVAAKSGALDSLRALVAECGIETP
PHLPPMSAGLIGYMSYDMVRLAEKLPDANPDPIKVPDGIFMRPTIMAVFDNVNGTLTAVA
PVWPRAGMDAQAAWDLAWERLEHIVESLESPLPHTYLGFPRDEHQPIPVPSVSPEHYCRM
VEKAQEYIAAGDIFQVVLSQRLAVPFRLPPFSLYRSLRRLNPSPFLFFLDLGEFQLVGSS
PEILVRLRDDKVTIRPIAGTRRRGKTPAEDEELAADLLADPKELAEHLMLLDLGRNDVGR
VAAIGTVEVTKKMTVEYYSHVMHIVSNVEGKIREGCDAMDALMAGFPAGTTSGAPKIRAM
EIIDELETERRSFYAGAIGYFDGNGNMDTCIALRTTLVKDGTMYVQAGAGIVADSVPLSE
HEECMNKARALVRAAEDAIDYTLVKQ