PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on AO353_03420 AO353_03420 phosphogluconate dehydratase (608 amino acids)

SeqID: AO353_03420 AO353_03420 phosphogluconate dehydratase
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 15598390: phosphogluconate dehydratase[Pseudomonas aeruginosa PAO1]]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

-------------------------------------------------------------------------------

Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>AO353_03420 AO353_03420 phosphogluconate dehydratase
MHPRVLEVTERLVTRSRATREAYLALIRGAASDGPMRGKLQCANFAHGVAGCGTEDKQSL
RMMNAANVAIVSSYNDMLSAHQPYEHYPEQIKHALREIGSVGQFAGGVPAMCDGVTQGEP
GMELGIASREVIAMSTAVALSHNMFDAAMMLGICDKIVPGLMMGALRFGHLPTIFVPGGP
MVSGISNKEKADVRQRYAEGKASREELLESEMKSYHSPGTCTFYGTANTNQLLMEVMGLH
LPGASFVNPNTPLRDALTREAAHQITRLTKQSGNFMPIGEIVDERSLVNSIVALHATGGS
TNHTLHMPAIAMAAGIQLTWQDMADLSEVVPTLSHVYPNGKADINHFQAAGGMSFLIREL
LEAGLLHEDVNTVAGHGLSRYTQEPFLENGELVWREGPIESLDENILRPVARAFSPEGGL
RVMEGNLGRGVMKVSAVAPEHQVVEAPAMVFQDQQDLADAFKAGLLEKDFVAVMRFQGPR
SNGMPELHKMTPFLGVLQDRGFKVALVTDGRMSGASGKIPAAIHVSPEAFVGGALARVQE
GDIIRVDGVKGTLQLLVDADEFAARTPAKGLLDNGIGCGRELFGFMRMAFSSAEQGASAF
TSALETLK