PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on AO353_03600 FitnessBrowser__pseudo3_N2E3:AO353_03600 (591 amino acids)

SeqID: AO353_03600 FitnessBrowser__pseudo3_N2E3:AO353_03600
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Cytoplasmic                   [matched PS50862: AA_TRNA_LIGASE_II Profile - Cytoplasmic ]
    SCL-BLAST-        Cytoplasmic                   [matched 97196806: Aspartyl-tRNA synthetase]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            10.00
    Periplasmic            0.00
    CytoplasmicMembrane    0.00
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            10.00

-------------------------------------------------------------------------------

Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>AO353_03600 FitnessBrowser__pseudo3_N2E3:AO353_03600
MMRSHYCGQLNESLEGQEVTLCGWVHRRRDHGGVIFLDIRDREGLAQVVFDPDRAETFAA
ADRVRSEYVVKITGKVRLRPAGAGNANMASGMIEVLGYELEVLNEAETPPFPLNEFSDVG
EETRLRYRFIDLRRPEMLEKLRLRSRMTTSIRRYLDENGFLDVETPILTRATPEGARDYL
VPSRTHAGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQPEFTQIDIETS
FLNEAEIMGLTEGMIRNLFKEVLGLEFGEFPHMTWDEAMRRYGSDKPDLRNPLELVDVAD
QLKEVDFKVFSGPANDPKSRIAALRVPGGASMPRSKIDDYTKFVGIYGAKGLAYIKVNER
AKGVEGLQSPIVKNIPEANLNVILDRVGAVDGDIVFFGADKAKIVSEALGALRIKVGHDL
NLLTCEWAPMWVVDFPMFEENDDGSFTALHHPFTAPKCTPEELEANPATALSRAYDMVLN
GTELGGGSIRIHRKEMQQSVFRLLGISEAEQEEKFGFLLDALKYGAPPHGGLAFGLDRLV
MLMTGAQSIREVIAFPKTQSAACVMTQAPGLVDAKALRELHIRLREQPKAE