PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on AO353_04180 FitnessBrowser__pseudo3_N2E3:AO353_04180 (501 amino acids)

SeqID: AO353_04180 FitnessBrowser__pseudo3_N2E3:AO353_04180
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 15598778: |glycerol kinase|4013685 - 4015202]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

-------------------------------------------------------------------------------

Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>AO353_04180 FitnessBrowser__pseudo3_N2E3:AO353_04180
MTDIQNKNYIIALDQGTTSSRAIIFDRDANVVCTAQREFAQHYPQAGWVEHDPMEIFATQ
SAVMVEALAQAGLHHDQVAAIGITNQRETTVVWDKTTGRPIYNAIVWQCRRSTEICQQLK
RDGFEQYISETTGLVTDPYFSGTKLKWILDNVEGSRERARKGELLFGTVDSWLIWKFTGG
KTHVTDYTNASRTMLFNIHTLEWDAKMLEVLDIPREMLPEVKSSSEIYGHTKSGIAIGGI
AGDQQAALFGQMCVEPGQAKNTYGTGCFLLMNTGDKAVKSRHGMLTTIACGPRGEVAYAL
EGAVFNGGSTVQWLRDELKIINDAHDTEYFANKVKDSNGVYLVPAFTGLGAPYWDPYARG
ALFGLTRGVRVDHIIRAALESIAYQTRDVLDAMQHDSGERLKALRVDGGAVANNFLMQFQ
ADILGTKVERPQMRETTALGAAYLAGLACGFWGSLDELRGKAVIEREFDPQLDETAKEKL
YAGWKKAVSRTRDWEPHEGAE