PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on AO353_08180 FitnessBrowser__pseudo3_N2E3:AO353_08180 (379 amino acids)

SeqID: AO353_08180 FitnessBrowser__pseudo3_N2E3:AO353_08180
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Unknown                       [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 1170927: Homoserine O-acetyltransferase]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.26
    Periplasmic            0.48
    CytoplasmicMembrane    0.24
    OuterMembrane          0.01
    Extracellular          0.01
  Final Prediction:
    Cytoplasmic            9.26

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>AO353_08180 FitnessBrowser__pseudo3_N2E3:AO353_08180
MPTAFPADSVGLVTPQVAHFSEPLALACGRSLPAYDLIYETYGTLNATASNAVLICHALS
GHHHAAGYHSTEDRKPGWWDSCIGPGKPIDTNKFFVVSLNNLGGCNGSTGPSSTNPDTGK
PFGADFPVLTVEDWVHSQARLADRIGINQWAAVIGGSLGGMQAIQWSITYPDRIRHCLAI
ASAPKLSAQNIAFNEVARQAILTDPDFHGGSFQEAGVIPKRGLMLARMVGHITYLSDDSM
GEKFGRGLKSEKLNYDFHSVEFQVESYLRYQGEEFSGRFDANTYLLMTKALDYFDPAANF
DDNLAKTFAGAKAKFCVMSFTTDWRFSPARSRELVDALMAAKKDVCYLEIDAPQGHDAFL
IPIPRYLQAFRNYMNRISL