PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on AO353_08685 FitnessBrowser__pseudo3_N2E3:AO353_08685 (432 amino acids)

SeqID: AO353_08685 FitnessBrowser__pseudo3_N2E3:AO353_08685
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 15600397: N-acetylglutamate synthase[Pseudomonas aeruginosa PAO1]]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

-------------------------------------------------------------------------------

Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>AO353_08685 FitnessBrowser__pseudo3_N2E3:AO353_08685
MPEYVNWLRHASPYINAHRDCTFVVMLPGDGVEHPNFGNIVHDLVLLHSLGVRLVLVHGS
RPQIETRLAARGLTPHYHHGMRITDAATLECVIDAVGQLRIAIEARLSMDMASSPMQGSR
LRVAGGNLVTARPIGVLEGIDYHHTGEVRRVDRKGINRLLDERSIVLLSPLGYSPTGEIF
NLACEDVATRAAIDLGADKLLLFGADPGLIDENGRLVRELRPQQVPAHLQRLGSNYQAEL
LDAAAEACRGGVGRSHIVSYAEDGALLTELFTRDGGGTLVAQEQFEVVREAAIEDVGGLL
DLISPLEEQGILVRRSREVLEREIEQFSVVEREGMIIACAALYQIADSDAGELACLAVNP
EYRHGGRGDELLERIETRARAQGLKTLFVLTTRTAHWFRERGFVPSSVERLPSARASLYN
YQRNSKIFEKTL