PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on AO353_09960 FitnessBrowser__pseudo3_N2E3:AO353_09960 (334 amino acids)

SeqID: AO353_09960 FitnessBrowser__pseudo3_N2E3:AO353_09960
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 16129721: cytoplasmic L-asparaginase I [Escherichia coli K12]]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

-------------------------------------------------------------------------------

Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>AO353_09960 FitnessBrowser__pseudo3_N2E3:AO353_09960
MIPATYPAAQHVMVLYTGGTIGMQASANGLAPASGFEARMRDYLHSQPDLVVPNWRFREM
TPLIDSANMTPAYWQRLRDAVIEAVDVDGCDSVLILHGTDTLAYSAAAMSFQLLGLHARV
LFTGSMLPAGVPDSDAWENLGGALVALGQGLAPGVQLYFHGELLDPTRCAKIRSFGRHPF
ARLQRQGGGVKAPALPTALEYRQSKQLAKVGVLPLFPGIGAEQLDGVLNSGIQGLVLECF
GSGTGPSDNPEFLASLARARDQGVVVVAITQCHEGGVELDVYEAGSRLRGVGVLSGGGMT
REAAFGKLHALLGADLDTAEVRRLVELDLCGELS