PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on AO356_02920 AO356_02920 acetyl-CoA carboxylase carboxyltransferase subunit (538 amino acids)

SeqID: AO356_02920 AO356_02920 acetyl-CoA carboxylase carboxyltransferase subunit
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 15598084: geranyl-CoA carboxylase, beta-subunit[Pseudomonas aeruginosa PAO1]]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>AO356_02920 AO356_02920 acetyl-CoA carboxylase carboxyltransferase subunit
MPVIESHLDPHSADFARNHAAMLAGVEQLRQLERAVLAKAAQAQDKFDQRGQLLPRQRLN
LLLDPGAPFLELASLAGYKLHDDKDGSQAGGGLIAGIGYVSGVRALVVANNSAIKGGTIS
PSGLHKTLRLQQIAMENKLPVITLAESGGANLNYAAQIFVEGARCFANQARMSAMGLPQI
TVVHGSATAGGAYQPGLSDYVVVVRDKARLFLAGPPLLKAATGEVASEEELGGALMHVQV
AGTAEYLAENDADGIRLAREILDLLPWNAQLPPQPERTWTEPLYPADELLGLVPDDPKKP
YDVGEIIARIADGSHFLAFKSEFDTQTICGHLHIRGHTCGLIGNNGPITPQGAAKAAQFI
QLCDQSRTPLLFLHNTTGFMVGTESERQGVIKHGAKMIQAVANARVPKLTVVVGGSYGAG
NYAMCGRGLDPRFIFAWPNSHTAVMGGAQAGKVLRMVTEATQLKNGLSPDPKMLDLLEQT
TAQKLDSQSTALYGSASLWDDGLIDPRDTRTLLGLLLDICHEAEQRPLQANSFGVARF