PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on AO356_10230 AO356_10230 cysteine desulfhydrase (330 amino acids)

SeqID: AO356_10230 AO356_10230 cysteine desulfhydrase
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 5915677: D-cysteine desulfhydrase]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>AO356_10230 AO356_10230 cysteine desulfhydrase
MIKEQLSRFNRLDLLSHPTPLEKLDRLSNWLGRDIYIKRDDLTPLALGGNKLRKLEYLAA
DAIAQGADTLITAGAIQSNHVRQTAALAAKLGLGCVALLENPIGTEDSNYLGNGNRLLLE
LFDAKVELVENLDNADEQLQALAGRLRSNGKKPYLVPIGGSNALGALGYVRAGLELAEQI
KDTGIEFAAVVLASGSAGTHSGLALALSESLPALPVIGVTVSRSEEDQFPKVQGLAERTA
ALLEVALPEAFKVILWDEYFAPRYGEPNAGTLAAVKLLASLEGLLLDPVYTGKAVAGLLD
GIGRDRFDEGPIIFLHTGGAPALFAYNTVF