PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on AO356_10330 AO356_10330 threonine dehydratase (504 amino acids)

SeqID: AO356_10330 AO356_10330 threonine dehydratase
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 15595528: threonine dehydratase, biosynthetic[Pseudomonas aeruginosa PAO1]]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>AO356_10330 AO356_10330 threonine dehydratase
MLEQYVKKILTSRVYDVAVETPLQTARQLSERLGNSILLKREDLQPVFSFKIRGAYNKLT
QLSDEERARGVVTASAGNHAQGLALAAKVLGVKATIVMPKTTPEIKVEGVRSRGGKVVLH
GDSFPEALAYSLKLVDEKGYVYIHPYDDPHTIAGQGTVAMEILRQHPGRLDAIFVPVGGG
GLIAGIAAYVKYLRPDIKIIGVEPDDSNCLQAAMAAGERVVLPTVGLFADGVAVAQIGQH
TFDICKHHVDEVITVSTDEICAAIKDIYDDTRSITEPAGALGVAGIKKYVESRGISGQTL
VAIDSGANVNFDRLRHVAERAELGEGREAIIAVTIPEQPGSFKAFCEAVGKRQITEFNYR
YNTGSEAHIFVGVQTHPENDPRSALIASLTEQGFPVLDLTDNELAKLHIRHMVGGHAAHV
IDEVVLRFEFPERPGALFNFLNKLGGRWNISMFHYRNHGAADGRVVAGLQVPHDERHLVP
AALEEIGYPYWDESDNPAYQLFLG