PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on AO356_14405 AO356_14405 alcohol dehydrogenase (382 amino acids)

SeqID: AO356_14405 AO356_14405 alcohol dehydrogenase
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [2 internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 462590: Cytoplasmic protein]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

-------------------------------------------------------------------------------

Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>AO356_14405 AO356_14405 alcohol dehydrogenase
MSLSSFKIAHKLITGAAAIEQLAAELTRLDVDNPLIVTDAALVQSGTVELALQHLGGRDY
EIFDRVMPDPEIAIVEDCMQAYRDGGHDGLIGLGGGSAIDIAKCVGVYAGYHGELQDMFG
VDQVPRKGPPMIAIPTTAGTGSEVTNVAILSDKAAQLKKGIVSDFLLPDVALVSPQMTLT
CPRGVTASSGVDALVHAIEAYLSLNASPITDALAIGAVKLISKALPKAYANPAHLQARED
MATASLMAGMAFGNAGVGAVHALAYPLGGRFHVSHGVANALLLPYVMAWNKMACVERMRD
IAEAMGIRTAHLSDMEAADEAVEAMVALCAAVEIPKGLSTLGVTEDVIPSMALEAVGIER
LMRNNPRKLTASDIEKIYRAAY