PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on AZOBR_RS06415 FitnessBrowser__azobra:AZOBR_RS06415 (737 amino acids)

SeqID: AZOBR_RS06415 FitnessBrowser__azobra:AZOBR_RS06415
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 16129225: component I of anthranilate synthase [Escherichia coli K12]]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>AZOBR_RS06415 FitnessBrowser__azobra:AZOBR_RS06415
MYPADLLASPSLLEPLRFQTRGGVAVTRCATALDPQGALDPVIDALDRRRGLLLSSGVEA
PGRYRRHALGFTDPPLAVTARGRTLRIDALNARGRVLLPAVAEALRGLEALAGLEEAPSR
VTALVRKPQHPFPEEERSRQPSLFSVLRAVLNLFAAPDDPLLGLYGAFAYDLAFQFEPIR
LRLERPDDQRDLVLYLPDRLVVLDPVAGLARLVEYEFATAAGSTEGLERAGRDHPYRPDT
NAEGGCDHAPGAYQRVVETAKAAFRRGDLFEVVPGQTFAEPCADAPSAVFRRLRAANPAP
YEAFVNLGRGEFLVAASPEMYVRVAGGRMGGRVETCPISGTVARGADALGDAAQVLRLLT
SAKDAAELTMCTDVDRNDKARVCEPGSVRVIGRRMIELYSRLIHTVDHVEGRLRPGLDAL
DAFLTHTWAVTVTGAPKRWAMQFLEDTEQSPRRWYGGAFGRLGFDGGMDTGLTLRTIRMA
EGVAYVRAGATLLSDSDPDAEDAECRLKAAAFRDAIRGVTEGVACALPAAPNGGRGRRVL
LVDHDDSFVHTLADYLRQTGASVMTLRHGHARAALAERRPDLVVLSPGPGRPADFNVAGT
IDAALALGLPVFGVCLGLQGMVERFGGALDVLPEPVHGKATEVRVLGGALFAGLPERMRV
GRYHSLVARRDRLPADLTVTAETADGLVMAVEHRRLPLAAVQFHPESILSLDGGAGLALL
GNVMDRLAAGALTDAAA