PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on AZOBR_RS07420 FitnessBrowser__azobra:AZOBR_RS07420 (470 amino acids)

SeqID: AZOBR_RS07420 FitnessBrowser__azobra:AZOBR_RS07420
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 115305750: Glutamyl-tRNA synthetase 2]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>AZOBR_RS07420 FitnessBrowser__azobra:AZOBR_RS07420
MTVVTRFAPSPTGFLHIGGARTALFNWLYARRNGGTYLLRIEDTDRQRSTDAAVDAILDG
LSWLGLDWDGDAVSQFARKDRHAEVAQQMLAAGRAYYCYASPEELEEMRAAQKAAGQPVR
YDGRWRDRDPSEAPAGVKPVIRLKAPQEGETVLKDRVQGEVTVQNAQLDDLILLRADGTP
TYLLAVVVDDHDMGVTHVIRGDDHLTNTFRQIQIYNAMGWDLPEFGHIPLIHGPDGAKLS
KRHGALGVDAYRDMGYLPEAIRNYLLRLGWGHGDDEIISTEQAVEWFNLEGIGRSPSRFD
FAKLENLNAHYMRQADDARLVGLATPRLEAELGRALTESERDLLTRAMNGLKQRARTVVD
LAQSARFYLAARPLAMDEKAAALLDEKGRGILTDLAARFEAEADFTAAALEGLVRAFAEE
RGEKLGKIAQPLRAALTGSTVSPPIFEVAEILGRAETLARMKDAATAARG